| Directory | File Name | Description |
| ./eesupp/inc/ | MAIN_PDIRECTIVES1.h | |
| ./eesupp/inc/ | MAIN_PDIRECTIVES2.h | |
| ./eesupp/inc/ | MPI_INFO.h | |
| ./eesupp/src/ | main.F | |
| ./eesupp/src/ | memsync.F | |
| ./model/inc/ | MASKS_MACROS.h | |
| ./model/inc/ | MASKW_MACROS.h | |
| ./model/src/ | modeldata_example.F | |
| ./model/src/ | momentum_correction_step.F | |
| ./optim/ | minimization.h | |
| ./pkg/aim_ocn_coupler/ | mds_byteswap.F | |
| ./pkg/autodiff/ | myactivefunction.F | |
| ./pkg/autodiff/ | myactivefunction_ad.F | |
| ./pkg/compon_communic/ | mitcomponent_init.F | |
| ./pkg/compon_communic/ | mitcomponent_register.F | |
| ./pkg/compon_communic/ | mitcomponent_tile_register.F | |
| ./pkg/compon_communic/ | mitcoupler_init.F | |
| ./pkg/compon_communic/ | mitcoupler_register.F | |
| ./pkg/compon_communic/ | mitcoupler_tile_register.F | |
| ./pkg/compon_communic/ | mitcplr_char2int.F | |
| ./pkg/compon_communic/ | mitcplr_char2real.F | |
| ./pkg/compon_communic/ | mitcplr_init1.F | |
| ./pkg/compon_communic/ | mitcplr_init2a.F | |
| ./pkg/compon_communic/ | mitcplr_init2b.F | |
| ./pkg/compon_communic/ | mitcplr_initcomp.F | |
| ./pkg/compon_communic/ | mitcplr_int2char.F | |
| ./pkg/compon_communic/ | mitcplr_match_comp.F | |
| ./pkg/compon_communic/ | mitcplr_real2char.F | |
| ./pkg/compon_communic/ | mitcplr_sortranks.F | |
| ./pkg/gridalt/ | make_phys_grid.F | |
| ./pkg/matrix/ | MATRIX.h | |
| ./pkg/matrix/ | matrix_init.F | |
| ./pkg/matrix/ | matrix_output.F | |
| ./pkg/matrix/ | matrix_readparms.F | |
| ./pkg/matrix/ | matrix_store_tendency.F | |
| ./pkg/matrix/ | matrix_write_grid.F | |
| ./pkg/matrix/ | matrix_write_tendency.F | |
| ./pkg/mdsio/ | MDSIO_OPTIONS.h | |
| ./pkg/mdsio/ | mdsio.F | |
| ./pkg/mdsio/ | mdsio_byteswapi4.F | |
| ./pkg/mdsio/ | mdsio_byteswapr4.F | |
| ./pkg/mdsio/ | mdsio_byteswapr8.F | |
| ./pkg/mdsio/ | mdsio_findunit.F | |
| ./pkg/mdsio/ | mdsio_gl.F | |
| ./pkg/mdsio/ | mdsio_gl_slice.F | |
| ./pkg/mdsio/ | mdsio_read_rl_vec.F | |
| ./pkg/mdsio/ | mdsio_read_rs_vec.F | |
| ./pkg/mdsio/ | mdsio_readfield.F | |
| ./pkg/mdsio/ | mdsio_readfield_loc.F | |
| ./pkg/mdsio/ | mdsio_readtile.F | |
| ./pkg/mdsio/ | mdsio_readvector.F | |
| ./pkg/mdsio/ | mdsio_reclen.F | |
| ./pkg/mdsio/ | mdsio_seg4torl.F | |
| ./pkg/mdsio/ | mdsio_seg4tors.F | |
| ./pkg/mdsio/ | mdsio_seg8torl.F | |
| ./pkg/mdsio/ | mdsio_seg8tors.F | |
| ./pkg/mdsio/ | mdsio_slice.F | |
| ./pkg/mdsio/ | mdsio_slice_loc.F | |
| ./pkg/mdsio/ | mdsio_write_rl_vec.F | |
| ./pkg/mdsio/ | mdsio_write_rs_vec.F | |
| ./pkg/mdsio/ | mdsio_writefield.F | |
| ./pkg/mdsio/ | mdsio_writefield_loc.F | |
| ./pkg/mdsio/ | mdsio_writelocal.F | |
| ./pkg/mdsio/ | mdsio_writemeta.F | |
| ./pkg/mdsio/ | mdsio_writetile.F | |
| ./pkg/mdsio/ | mdsio_writevector.F | |
| ./pkg/mdsio/ | mdswritefield_new.F | |
| ./pkg/mnc/ | MNC_OPTIONS.h | |
| ./pkg/mnc/ | MNC_PARAMS.h | |
| ./pkg/mnc/ | MNC_SIZE.h | |
| ./pkg/mnc/ | mnc_common.h | |
| ./pkg/mnc/ | mnc_cw_cvars.F | |
| ./pkg/mnc/ | mnc_cw_init.F | |
| ./pkg/mnc/ | mnc_cw_model_attr.F | |
| ./pkg/mnc/ | mnc_cw_udim.F | |
| ./pkg/mnc/ | mnc_cw_write_grid_info.F | |
| ./pkg/mnc/ | mnc_cwrapper.F | |
| ./pkg/mnc/ | mnc_dim.F | |
| ./pkg/mnc/ | mnc_dump.F | |
| ./pkg/mnc/ | mnc_file.F | |
| ./pkg/mnc/ | mnc_grid.F | |
| ./pkg/mnc/ | mnc_init.F | |
| ./pkg/mnc/ | mnc_readparms.F | |
| ./pkg/mnc/ | mnc_utils.F | |
| ./pkg/mnc/ | mnc_var.F | |
| ./pkg/mom_common/ | MOM_COMMON_OPTIONS.h | |
| ./pkg/mom_common/ | mom_calc_absvort3.F | |
| ./pkg/mom_common/ | mom_calc_hdiv.F | |
| ./pkg/mom_common/ | mom_calc_hfacz.F | |
| ./pkg/mom_common/ | mom_calc_ke.F | |
| ./pkg/mom_common/ | mom_calc_relvort3.F | |
| ./pkg/mom_common/ | mom_calc_strain.F | |
| ./pkg/mom_common/ | mom_calc_tension.F | |
| ./pkg/mom_common/ | mom_hdissip.F | |
| ./pkg/mom_common/ | mom_u_bottomdrag.F | |
| ./pkg/mom_common/ | mom_u_implicit_r.F | |
| ./pkg/mom_common/ | mom_u_rviscflux.F | |
| ./pkg/mom_common/ | mom_u_sidedrag.F | |
| ./pkg/mom_common/ | mom_v_bottomdrag.F | |
| ./pkg/mom_common/ | mom_v_implicit_r.F | |
| ./pkg/mom_common/ | mom_v_rviscflux.F | |
| ./pkg/mom_common/ | mom_v_sidedrag.F | |
| ./pkg/mom_fluxform/ | MOM_FLUXFORM_OPTIONS.h | |
| ./pkg/mom_fluxform/ | mom_calc_rtrans.F | |
| ./pkg/mom_fluxform/ | mom_fluxform.F | |
| ./pkg/mom_fluxform/ | mom_u_adv_uu.F | |
| ./pkg/mom_fluxform/ | mom_u_adv_vu.F | |
| ./pkg/mom_fluxform/ | mom_u_adv_wu.F | |
| ./pkg/mom_fluxform/ | mom_u_coriolis.F | |
| ./pkg/mom_fluxform/ | mom_u_coriolis_nh.F | |
| ./pkg/mom_fluxform/ | mom_u_del2u.F | |
| ./pkg/mom_fluxform/ | mom_u_metric_cylinder.F | |
| ./pkg/mom_fluxform/ | mom_u_metric_nh.F | |
| ./pkg/mom_fluxform/ | mom_u_metric_sphere.F | |
| ./pkg/mom_fluxform/ | mom_u_xviscflux.F | |
| ./pkg/mom_fluxform/ | mom_u_yviscflux.F | |
| ./pkg/mom_fluxform/ | mom_v_adv_uv.F | |
| ./pkg/mom_fluxform/ | mom_v_adv_vv.F | |
| ./pkg/mom_fluxform/ | mom_v_adv_wv.F | |
| ./pkg/mom_fluxform/ | mom_v_coriolis.F | |
| ./pkg/mom_fluxform/ | mom_v_del2v.F | |
| ./pkg/mom_fluxform/ | mom_v_metric_cylinder.F | |
| ./pkg/mom_fluxform/ | mom_v_metric_nh.F | |
| ./pkg/mom_fluxform/ | mom_v_metric_sphere.F | |
| ./pkg/mom_fluxform/ | mom_v_xviscflux.F | |
| ./pkg/mom_fluxform/ | mom_v_yviscflux.F | |
| ./pkg/mom_vecinv/ | MOM_VECINV_OPTIONS.h | |
| ./pkg/mom_vecinv/ | mom_vecinv.F | |
| ./pkg/mom_vecinv/ | mom_vi_coriolis.F | |
| ./pkg/mom_vecinv/ | mom_vi_del2uv.F | |
| ./pkg/mom_vecinv/ | mom_vi_hdissip.F | |
| ./pkg/mom_vecinv/ | mom_vi_u_coriolis.F | |
| ./pkg/mom_vecinv/ | mom_vi_u_coriolis_c4.F | |
| ./pkg/mom_vecinv/ | mom_vi_u_grad_ke.F | |
| ./pkg/mom_vecinv/ | mom_vi_u_vertshear.F | |
| ./pkg/mom_vecinv/ | mom_vi_v_coriolis.F | |
| ./pkg/mom_vecinv/ | mom_vi_v_coriolis_c4.F | |
| ./pkg/mom_vecinv/ | mom_vi_v_grad_ke.F | |
| ./pkg/mom_vecinv/ | mom_vi_v_vertshear.F | |
| ./pkg/monitor/ | MONITOR.h | |
| ./pkg/monitor/ | MONITOR_OPTIONS.h | |
| ./pkg/monitor/ | mon_advcfl.F | |
| ./pkg/monitor/ | mon_advcflw.F | |
| ./pkg/monitor/ | mon_advcflw2.F | |
| ./pkg/monitor/ | mon_init.F | |
| ./pkg/monitor/ | mon_ke.F | |
| ./pkg/monitor/ | mon_out.F | |
| ./pkg/monitor/ | mon_printstats_rl.F | |
| ./pkg/monitor/ | mon_printstats_rs.F | |
| ./pkg/monitor/ | mon_set_iounit.F | |
| ./pkg/monitor/ | mon_set_pref.F | |
| ./pkg/monitor/ | mon_solution.F | |
| ./pkg/monitor/ | mon_stats_latbnd_rl.F | |
| ./pkg/monitor/ | mon_stats_rl.F | |
| ./pkg/monitor/ | mon_stats_rs.F | |
| ./pkg/monitor/ | mon_surfcor.F | |
| ./pkg/monitor/ | mon_vort3.F | |
| ./pkg/monitor/ | mon_writestats_rl.F | |
| ./pkg/monitor/ | monitor.F | |
| ./pkg/my82/ | MY82.h | |
| ./pkg/my82/ | MY82_DIAGS.h | |
| ./pkg/my82/ | MY82_OPTIONS.h | |
| ./pkg/my82/ | my82_calc.F | |
| ./pkg/my82/ | my82_calc_diff.F | |
| ./pkg/my82/ | my82_calc_visc.F | |
| ./pkg/my82/ | my82_check.F | |
| ./pkg/my82/ | my82_do_diags.F | |
| ./pkg/my82/ | my82_init.F | |
| ./pkg/my82/ | my82_readparms.F | |
| ./pkg/my82/ | my82_ri_number.F | |
| ./verification/aim.5l_cs/code/ | mom_vi_hfacz_diss.F | |
| ./verification/aim.5l_cs/code/ | mom_vi_mask_vort3.F |