# Multithreaded + multi-processing makefile for:
#    Linux eaps-80-15e 2.6.43.8-1.fc15.x86_64 #1 SMP Mon Jun 4 20:33:44 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux
# This makefile was generated automatically on
#    Sun Aug  9 00:19:17 EDT 2015
# by the command:
#    ../../../tools/genmake2 -ds -m make -mods=../code -optfile=/scratch/jm_c/test_acesgrid/MITgcm_gnu/tools/build_options/linux_amd64_gfortran -ieee -mpi
# executed by:
#    jm_c@eaps-80-15e:/scratch/jm_c/test_acesgrid/MITgcm_gnu/verification/fizhi-cs-aqualev20/build
#
# OPTFILE="/scratch/jm_c/test_acesgrid/MITgcm_gnu/tools/build_options/linux_amd64_gfortran"
#
# BUILDDIR     : Directory where object files are written
# SOURCEDIRS   : Directories containing the source (.F) files
# INCLUDEDIRS  : Directories containing the header-source (.h) files
# EXEDIR       : Directory where executable that is generated is written
# EXECUTABLE   : Full path of executable binary
#
# CPP          : C-preprocessor command
# INCLUDES     : Directories searched for header files
# DEFINES      : Macro definitions for CPP
# MAKEDEPEND   : Dependency generator
# FC           : Fortran compiler command
# FFLAGS       : Configuration/debugging options for FC
# FOPTIM       : Optimization options for FC
# LINK         : Command for link editor program
# LIBS         : Library flags /or/ additional optimization/debugging flags

ROOTDIR     = ../../..
BUILDDIR    = .
SOURCEDIRS  =  ../code ../../../pkg/debug ../../../pkg/diagnostics ../../../pkg/exch2 ../../../pkg/fizhi ../../../pkg/generic_advdiff ../../../pkg/gridalt ../../../pkg/mdsio ../../../pkg/mnc ../../../pkg/mom_common ../../../pkg/mom_vecinv ../../../pkg/monitor ../../../pkg/rw ../../../pkg/shap_filt ../../../pkg/timeave ../../../pkg/atm_common ../../../eesupp/src ../../../model/src
INCLUDEDIRS =  /mit/software/gcc/gcc-4.6.0/pkg/mvapich2/mvapich2-1.7/include ../code ../../../pkg/debug ../../../pkg/diagnostics ../../../pkg/exch2 ../../../pkg/fizhi ../../../pkg/generic_advdiff ../../../pkg/gridalt ../../../pkg/mdsio ../../../pkg/mnc ../../../pkg/mom_common ../../../pkg/mom_vecinv ../../../pkg/monitor ../../../pkg/rw ../../../pkg/shap_filt ../../../pkg/timeave ../../../pkg/atm_common ../../../eesupp/inc ../../../model/inc
EXEDIR      = .
EXECUTABLE  = $(EXEDIR)/mitgcmuv
TOOLSDIR    = ../../../tools
OADTOOLS    = 

#eh3  new defines for the adjoint work
AUTODIFF    = ../../../pkg/autodiff
EXE_AD      = mitgcmuv_ad
EXE_FTL     = mitgcmuv_ftl
EXE_SVD     = mitgcmuv_svd

ENABLED_PACKAGES =  -DALLOW_DEBUG -DALLOW_DIAGNOSTICS -DALLOW_EXCH2 -DALLOW_FIZHI -DALLOW_GENERIC_ADVDIFF -DALLOW_GRIDALT -DALLOW_MDSIO -DALLOW_MNC -DALLOW_MOM_COMMON -DALLOW_MOM_VECINV -DALLOW_MONITOR -DALLOW_RW -DALLOW_SHAP_FILT -DALLOW_TIMEAVE -DALLOW_ATM_COMMON
DISABLED_PACKAGES =  -UALLOW_ADMTLM -UALLOW_AIM_V23 -UALLOW_ATM2D -UALLOW_ATM_COMPON_INTERF -UALLOW_ATM_OCN_COUPLER -UALLOW_ATM_PHYS -UALLOW_AUTODIFF -UALLOW_BBL -UALLOW_BULK_FORCE -UALLOW_CAL -UALLOW_CD_CODE -UALLOW_CFC -UALLOW_CHEAPAML -UALLOW_CHRONOS -UALLOW_COMPON_COMMUNIC -UALLOW_COST -UALLOW_CTRL -UALLOW_DIC -UALLOW_DOWN_SLOPE -UALLOW_EBM -UALLOW_ECCO -UALLOW_EMBED_FILES -UALLOW_EXF -UALLOW_FLT -UALLOW_FRAZIL -UALLOW_GCHEM -UALLOW_GGL90 -UALLOW_GMREDI -UALLOW_GRDCHK -UALLOW_ICEFRONT -UALLOW_KL10 -UALLOW_KPP -UALLOW_LAND -UALLOW_LAYERS -UALLOW_LONGSTEP -UALLOW_MATRIX -UALLOW_MOM_FLUXFORM -UALLOW_MY82 -UALLOW_MYPACKAGE -UALLOW_OBCS -UALLOW_OCN_COMPON_INTERF -UALLOW_OFFLINE -UALLOW_OPENAD -UALLOW_OPPS -UALLOW_PP81 -UALLOW_PROFILES -UALLOW_PTRACERS -UALLOW_RBCS -UALLOW_REGRID -UALLOW_RUNCLOCK -UALLOW_SALT_PLUME -UALLOW_SBO -UALLOW_SEAICE -UALLOW_SHELFICE -UALLOW_SHOWFLOPS -UALLOW_SMOOTH -UALLOW_SPHERE -UALLOW_STREAMICE -UALLOW_THSICE -UALLOW_ZONAL_FILT

# These files are created by Makefile
SPECIAL_FILES = PACKAGES_CONFIG.h AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
EMBEDDED_FILES = 
# Unix ln (link)
LN = ln -s
# Dependency generator
MAKEDEPEND = $(TOOLSDIR)/xmakedepend
# Special preprocessor (KAP on DECs, FPP on Crays)
KPP = 
# Fortran compiler
FC = mpif77
# Fortran compiler
F90C = mpif90
# C compiler
CC = mpicc
# Link editor
LINK = mpif77 
export 

# Defines for CPP
DEFINES = -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_NETCDF -DHAVE_FLUSH 
# Includes for CPP
INCLUDES =  -I/mit/software/gcc/gcc-4.6.0/pkg/mvapich2/mvapich2-1.7/include
# default CPP includes for makedepend
CPPINCLUDES =  -I/mit/software/gcc/gcc-4.6.0/pkg/mvapich2/mvapich2-1.7/include/primitives -I/mit/software/gcc/gcc-4.6.0/pkg/mvapich2/mvapich2-1.7/include -I/usr/lib/gcc/x86_64-redhat-linux/4.6.3/include -I/usr/local/include -I/usr/include
# Flags for KPP
KFLAGS1 = 
KFLAGS2 = 
# Optim./debug for FC
FFLAGS = -fdefault-real-8 -fdefault-double-8 -fconvert=big-endian -fimplicit-none -mcmodel=medium -Wall
FOPTIM = -O0 
# Optim./debug for FC
F90FLAGS = -fdefault-real-8 -fdefault-double-8 -fconvert=big-endian -fimplicit-none -mcmodel=medium -Wall
F90OPTIM = -O0
F90FIXEDFORMAT = -ffixed-form
# Flags for CC
CFLAGS = -O0 -mcmodel=medium
# Files that should not be optimized
NOOPTFILES = 
NOOPTFLAGS = -O0
# Flags and libraries needed for linking
LIBS =  -lnetcdff -lnetcdf
# Name of the makefile
MAKEFILE = Makefile
# Name of the make program
MAKE = make

F77_SRC_FILES =  \
 fizhi_init_fixed.F \
 fizhi_init_veg.F \
 fizhi_init_vegsurftiles.F \
 ini_salt.F \
 update_ocean_exports.F \
 chksum_tiled.F \
 debug_call.F \
